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alignx program vector nti suite software  (InforMax Inc)

 
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    InforMax Inc alignx program vector nti suite software
    Comparative sequence analysis of the nsp1α/nsp1β and nsp1β/nsp2 cleavage sites. Partial ORF1a amino acid sequence of six PRRSV strains corresponding to SD23983 ORF1a amino acid position 160–204 and 361–409 was aligned with EAV nsp1. The alignment was generated <t>by</t> <t>ALIGNX</t> program of Vector <t>NTI</t> Suite software (InforMax, Inc.). Two boxes depicted in the map of amino acid sequence comparison represent the result of nsp1β and nsp2 protein N-terminal sequencing, which was determined by sequential Edman degradation of 10 cycles for each viral protein. The upward and downward solid arrows point to the identified cleavage site of nsp1β/nsp2 and nsp1α/nsp1β, respectively. The downward dashed arrow points to the predicted nsp1α/nsp1β cleavage site.
    Alignx Program Vector Nti Suite Software, supplied by InforMax Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/alignx+program+vector+nti+suite+software/vector+nti+alignx+software+package/pmc07111964-72-8-12
    Average 90 stars, based on 1 article reviews
    alignx program vector nti suite software - by Bioz Stars, 2026-10
    90/100 stars

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    1) Product Images from "Identification of two auto-cleavage products of nonstructural protein 1 (nsp1) in porcine reproductive and respiratory syndrome virus infected cells: nsp1 function as interferon antagonist"

    Article Title: Identification of two auto-cleavage products of nonstructural protein 1 (nsp1) in porcine reproductive and respiratory syndrome virus infected cells: nsp1 function as interferon antagonist

    Journal: Virology

    doi: 10.1016/j.virol.2009.11.033

    Comparative sequence analysis of the nsp1α/nsp1β and nsp1β/nsp2 cleavage sites. Partial ORF1a amino acid sequence of six PRRSV strains corresponding to SD23983 ORF1a amino acid position 160–204 and 361–409 was aligned with EAV nsp1. The alignment was generated by ALIGNX program of Vector NTI Suite software (InforMax, Inc.). Two boxes depicted in the map of amino acid sequence comparison represent the result of nsp1β and nsp2 protein N-terminal sequencing, which was determined by sequential Edman degradation of 10 cycles for each viral protein. The upward and downward solid arrows point to the identified cleavage site of nsp1β/nsp2 and nsp1α/nsp1β, respectively. The downward dashed arrow points to the predicted nsp1α/nsp1β cleavage site.
    Figure Legend Snippet: Comparative sequence analysis of the nsp1α/nsp1β and nsp1β/nsp2 cleavage sites. Partial ORF1a amino acid sequence of six PRRSV strains corresponding to SD23983 ORF1a amino acid position 160–204 and 361–409 was aligned with EAV nsp1. The alignment was generated by ALIGNX program of Vector NTI Suite software (InforMax, Inc.). Two boxes depicted in the map of amino acid sequence comparison represent the result of nsp1β and nsp2 protein N-terminal sequencing, which was determined by sequential Edman degradation of 10 cycles for each viral protein. The upward and downward solid arrows point to the identified cleavage site of nsp1β/nsp2 and nsp1α/nsp1β, respectively. The downward dashed arrow points to the predicted nsp1α/nsp1β cleavage site.

    Techniques Used: Sequencing, Generated, Plasmid Preparation, Software

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    Comparative sequence analysis of the nsp1α/nsp1β and nsp1β/nsp2 cleavage sites. Partial ORF1a amino acid sequence of six PRRSV strains corresponding to SD23983 ORF1a amino acid position 160–204 and 361–409 was aligned with EAV nsp1. The alignment was generated <t>by</t> <t>ALIGNX</t> program of Vector <t>NTI</t> Suite software (InforMax, Inc.). Two boxes depicted in the map of amino acid sequence comparison represent the result of nsp1β and nsp2 protein N-terminal sequencing, which was determined by sequential Edman degradation of 10 cycles for each viral protein. The upward and downward solid arrows point to the identified cleavage site of nsp1β/nsp2 and nsp1α/nsp1β, respectively. The downward dashed arrow points to the predicted nsp1α/nsp1β cleavage site.
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    Comparison of amino acid sequences among auxin efflux carriers from bitter gourd (McPIN1 to 3), and cucumber (CsPIN1 to 6). Gaps have been introduced to maximize the alignments. Amino acid sequences were aligned using the AlignX program of Vector NTI Suite 10.0 software. An arrow indicates the cleavage site of a potential signal peptide analyzed by SignalP 3.0 . Conserved transmembrane domains are indicated by red bars above sequences. Putative clusters (blue bar) of glycosylation (red dot) and two phosphorylation sites (blue dot) are indicated. Red stars indicate the internalization motif NPXXY . GenBank accession numbers are AF247004 (McPIN1), AF246995 (McPIN2), AF247005 (McPIN3), AB085897 (CsPIN1), and AF539049–AF539053 (CsPIN2 to 6).

    Journal: International Journal of Molecular Sciences

    Article Title: Two Paralogous Genes Encoding Auxin Efflux Carrier Differentially Expressed in Bitter Gourd ( Momordica charantia )

    doi: 10.3390/ijms18112343

    Figure Lengend Snippet: Comparison of amino acid sequences among auxin efflux carriers from bitter gourd (McPIN1 to 3), and cucumber (CsPIN1 to 6). Gaps have been introduced to maximize the alignments. Amino acid sequences were aligned using the AlignX program of Vector NTI Suite 10.0 software. An arrow indicates the cleavage site of a potential signal peptide analyzed by SignalP 3.0 . Conserved transmembrane domains are indicated by red bars above sequences. Putative clusters (blue bar) of glycosylation (red dot) and two phosphorylation sites (blue dot) are indicated. Red stars indicate the internalization motif NPXXY . GenBank accession numbers are AF247004 (McPIN1), AF246995 (McPIN2), AF247005 (McPIN3), AB085897 (CsPIN1), and AF539049–AF539053 (CsPIN2 to 6).

    Article Snippet: Amino acid sequences were aligned using the AlignX program of Vector NTI Suite 10.0 Software (Thermo Fisher Scientific Inc., Waltham, MA, USA).

    Techniques: Plasmid Preparation, Software

    Amino acid sequence-based dendrogram among auxin efflux carriers from bitter gourd (McPIN1 to 3), cucumber (CsPIN1 to 6), and tomato (SlPIN1 to 10). GenBank accession numbers are AF247004 (McPIN1), AF246995 (McPIN2), AF247005 (McPIN3), AB085897 (CsPIN1), AF539049–AF539053 (CsPIN2 to 6), and HQ127074–HQ127083 (SlPIN1 to 10). Amino acid sequences were aligned using the AlignX program of Vector NTI Suite 10.0 software. Phylogenetic analysis was performed with the Neighbor-Joining program in Vector NTI Suite 9.0 software and output as circle by MEGA 7.0 package (, http://www.megasoftware.net ). Scale bar indicates the number of amino acid substitutions per site.

    Journal: International Journal of Molecular Sciences

    Article Title: Two Paralogous Genes Encoding Auxin Efflux Carrier Differentially Expressed in Bitter Gourd ( Momordica charantia )

    doi: 10.3390/ijms18112343

    Figure Lengend Snippet: Amino acid sequence-based dendrogram among auxin efflux carriers from bitter gourd (McPIN1 to 3), cucumber (CsPIN1 to 6), and tomato (SlPIN1 to 10). GenBank accession numbers are AF247004 (McPIN1), AF246995 (McPIN2), AF247005 (McPIN3), AB085897 (CsPIN1), AF539049–AF539053 (CsPIN2 to 6), and HQ127074–HQ127083 (SlPIN1 to 10). Amino acid sequences were aligned using the AlignX program of Vector NTI Suite 10.0 software. Phylogenetic analysis was performed with the Neighbor-Joining program in Vector NTI Suite 9.0 software and output as circle by MEGA 7.0 package (, http://www.megasoftware.net ). Scale bar indicates the number of amino acid substitutions per site.

    Article Snippet: Amino acid sequences were aligned using the AlignX program of Vector NTI Suite 10.0 Software (Thermo Fisher Scientific Inc., Waltham, MA, USA).

    Techniques: Sequencing, Plasmid Preparation, Software

    Comparative sequence analysis of the nsp1α/nsp1β and nsp1β/nsp2 cleavage sites. Partial ORF1a amino acid sequence of six PRRSV strains corresponding to SD23983 ORF1a amino acid position 160–204 and 361–409 was aligned with EAV nsp1. The alignment was generated by ALIGNX program of Vector NTI Suite software (InforMax, Inc.). Two boxes depicted in the map of amino acid sequence comparison represent the result of nsp1β and nsp2 protein N-terminal sequencing, which was determined by sequential Edman degradation of 10 cycles for each viral protein. The upward and downward solid arrows point to the identified cleavage site of nsp1β/nsp2 and nsp1α/nsp1β, respectively. The downward dashed arrow points to the predicted nsp1α/nsp1β cleavage site.

    Journal: Virology

    Article Title: Identification of two auto-cleavage products of nonstructural protein 1 (nsp1) in porcine reproductive and respiratory syndrome virus infected cells: nsp1 function as interferon antagonist

    doi: 10.1016/j.virol.2009.11.033

    Figure Lengend Snippet: Comparative sequence analysis of the nsp1α/nsp1β and nsp1β/nsp2 cleavage sites. Partial ORF1a amino acid sequence of six PRRSV strains corresponding to SD23983 ORF1a amino acid position 160–204 and 361–409 was aligned with EAV nsp1. The alignment was generated by ALIGNX program of Vector NTI Suite software (InforMax, Inc.). Two boxes depicted in the map of amino acid sequence comparison represent the result of nsp1β and nsp2 protein N-terminal sequencing, which was determined by sequential Edman degradation of 10 cycles for each viral protein. The upward and downward solid arrows point to the identified cleavage site of nsp1β/nsp2 and nsp1α/nsp1β, respectively. The downward dashed arrow points to the predicted nsp1α/nsp1β cleavage site.

    Article Snippet: The alignment was generated by ALIGNX program of Vector NTI Suite software (InforMax, Inc.).

    Techniques: Sequencing, Generated, Plasmid Preparation, Software